DSE

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, DSE mutation is significantly associated with the RNA expression of many other genes, with 2,411 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible DSE-associated genes across cancer lineages are COX6B1P2, DBIP2, and MND1. Each is linked with DSE in more than 2 cancer types. Because this analysis shows association rather than direction, both DSE-to-partner and partner-to-DSE results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, COX6B1P2 grouped by DSE-low versus DSE-high in LUSC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (DSE→partner) and Y-score (partner→DSE) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUSCCOX6B1P2 →+0.257+5.625<.001.00433
BLCADBIP2 →+0.823+4.343<.001.00233
UCECMND1 →+0.567+1.546.001.00833
UCECTEDC2 →+0.552+2.502<.001.00133
LIHCRNA5SP531 →+0.201+5.584<.001.00132
LIHCLINC02464 →+0.163+4.693<.001.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 2,411 associations by consensus.

COX6B1P2 by DSE expression — LUSC

Box plot of COX6B1P2 in DSE-low vs DSE-high samples in LUSC.

Explore this box plot interactively →

Exploration