DSE

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, DSE RNA expression is significantly associated with the go_rna of many other GO terms, with 6,380 significant associations in total. BREAST shows the largest number of these associations.

The most reproducible DSE-associated GO terms across cancer lineages are Regulation of intracellular protein transport, Regulation of defense response to virus, and Positive regulation of extracellular matrix disassembly. Each is linked with DSE in more than 15 cancer types. Because this analysis shows association rather than direction, both DSE-to-partner and partner-to-DSE results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Regulation of intracellular protein transport grouped by DSE-low versus DSE-high in PANCREAS.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (DSE→partner) and Y-score (partner→DSE) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
PANCREASRegulation of intracellular protein transport →+0.081+1.613.001.004316
UPPER_AERODIGESTIVE_TRACTRegulation of defense response to virus →+0.093+1.699.002<.001314
BREASTPositive regulation of extracellular matrix disassembly →+0.208+2.029<.001<.001314
LUNG_NSCLC_LUSCHeparan sulfate proteoglycan biosynthetic process →+0.117+2.078<.001<.001313
LUNG_NSCLC_LUSCDermatan sulfate proteoglycan metabolic process →+0.166+2.434.002.001313
BONEPositive regulation of focal adhesion assembly →+0.186+1.469<.001<.001313
Each partner links to its Q-omics profile. Showing the 6 strongest of 6,380 associations by consensus.

Regulation of intracellular protein transport by DSE expression — PANCREAS

Box plot of Regulation of intracellular protein transport in DSE-low vs DSE-high samples in PANCREAS.

Explore this box plot interactively →

Exploration