DPCD

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, DPCD RNA expression is significantly associated with the go_rna of many other GO terms, with 3,095 significant associations in total. BLOOD_Leukemia shows the largest number of these associations.

The most reproducible DPCD-associated GO terms across cancer lineages are Intraciliary anterograde transport, Protein localization to ciliary transition zone, and Protein localization to ciliary membrane. Each is linked with DPCD in more than 13 cancer types. Because this analysis shows association rather than direction, both DPCD-to-partner and partner-to-DPCD results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Intraciliary anterograde transport grouped by DPCD-low versus DPCD-high in LUNG_SCLC.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (DPCD→partner) and Y-score (partner→DPCD) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUNG_SCLCIntraciliary anterograde transport →+0.090+0.864.004.009312
LUNG_SCLCProtein localization to ciliary transition zone →+0.075+1.133<.001<.001312
LUNG_NSCLC_LUADProtein localization to ciliary membrane →+0.091+0.925<.001<.001312
BREASTProtein localization to cilium →+0.054+1.032.005.005114
LIVERIntraciliary transport involved in cilium assembly →+0.122+1.231<.001<.001311
BREASTTransport along microtubule →+0.064+1.644<.001<.00138
Each partner links to its Q-omics profile. Showing the 6 strongest of 3,095 associations by consensus.

Intraciliary anterograde transport by DPCD expression — LUNG_SCLC

Box plot of Intraciliary anterograde transport in DPCD-low vs DPCD-high samples in LUNG_SCLC.

Explore this box plot interactively →

Exploration