DNA2

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, DNA2 RNA expression is significantly associated with the protein abundance of many other proteins, with 23,818 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible DNA2-associated proteins across cancer lineages are RFC2, CDC20_T70, and CDK1. Each is linked with DNA2 in more than 9 cancer types. Because this analysis shows association rather than direction, both DNA2-to-partner and partner-to-DNA2 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, DNA2 versus RFC2 in LSCC, with a Pearson correlation of 0.69.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (DNA2→partner) and Y-score (partner→DNA2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LSCCRFC2 →+0.423+0.756<.001<.001310
LUADCDC20_T70 →+1.405+0.912<.001<.001310
LUADCDK1 →+1.012+0.821<.001<.001310
OVVRK3_S136 →+0.859+0.734<.001<.00139
LUADRFC1_S368 →+0.954+0.810<.001<.00139
LUADRFC1_T506 →+1.099+0.814<.001<.00139
Each partner links to its Q-omics profile. Showing the 6 strongest of 23,818 associations by consensus.

DNA2 vs RFC2 — LSCC

Per-sample scatter of DNA2 vs RFC2 in LSCC (Pearson r = 0.69).

Explore this scatter interactively →

Exploration