DMKN

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, DMKN protein abundance is significantly associated with the RNA expression of many other genes, with 9,172 significant associations in total. HNSC shows the largest number of these associations.

The most reproducible DMKN-associated genes across cancer lineages are GJB6, RHCG, and CAPN13. Each is linked with DMKN in more than 2 cancer types. Because this analysis shows association rather than direction, both DMKN-to-partner and partner-to-DMKN results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, DMKN versus GJB6 in BRCA, with a Pearson correlation of 0.68.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (DMKN→partner) and Y-score (partner→DMKN) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCAGJB6 →+2.691+1.765.001.00233
HNSCRHCG →+2.552+1.156<.001<.00133
BRCACAPN13 →-2.884-1.489.003.00333
HNSCKRTDAP →+3.232+1.465<.001<.00133
BRCAICA1 →-1.230-1.397<.001.00333
OVCFAP91 →-1.147-1.160.001.00933
Each partner links to its Q-omics profile. Showing the 6 strongest of 9,172 associations by consensus.

DMKN vs GJB6 — BRCA

Per-sample scatter of DMKN vs GJB6 in BRCA (Pearson r = 0.68).

Explore this scatter interactively →

Exploration