DMGDH

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, DMGDH RNA expression is significantly associated with the go_rna of many other GO terms, with 3,464 significant associations in total. BLOOD_Lymphoma shows the largest number of these associations.

The most reproducible DMGDH-associated GO terms across cancer lineages are Amino-acid betaine catabolic process, Response to endoplasmic reticulum stress, and Target-directed miRNA degradation. Each is linked with DMGDH in more than 18 cancer types. Because this analysis shows association rather than direction, both DMGDH-to-partner and partner-to-DMGDH results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Amino-acid betaine catabolic process grouped by DMGDH-low versus DMGDH-high in KIDNEY.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (DMGDH→partner) and Y-score (partner→DMGDH) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
KIDNEYAmino-acid betaine catabolic process →+1.147+2.637<.001<.001319
UPPER_AERODIGESTIVE_TRACTResponse to endoplasmic reticulum stress →+0.047+0.549<.001<.001314
BLOOD_MyelomaTarget-directed miRNA degradation →+0.097+1.114.006.004313
SOFT_TISSUEEndonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) →-0.113-0.837<.001.001312
LIVEREstablishment of protein localization to endoplasmic reticulum →+0.109+1.847<.001<.001312
BLOOD_LymphomaProtein exit from endoplasmic reticulum →+0.085+0.934.001<.001312
Each partner links to its Q-omics profile. Showing the 6 strongest of 3,464 associations by consensus.

Amino-acid betaine catabolic process by DMGDH expression — KIDNEY

Box plot of Amino-acid betaine catabolic process in DMGDH-low vs DMGDH-high samples in KIDNEY.

Explore this box plot interactively →

Exploration