DLC1

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, DLC1 mutation is significantly associated with the RNA expression of many other genes, with 2,245 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible DLC1-associated genes across cancer lineages are SLCO1C1, FZD3, and ZNF330. Each is linked with DLC1 in more than 1 cancer types. Because this analysis shows association rather than direction, both DLC1-to-partner and partner-to-DLC1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, SLCO1C1 grouped by DLC1-low versus DLC1-high in LUNG_SCLC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (DLC1→partner) and Y-score (partner→DLC1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUNG_SCLCSLCO1C1 →+0.192+3.750<.001.00332
LARGE_INTESTINEFZD3 →+0.628+1.891.001<.00132
LARGE_INTESTINEZNF330 →+0.424+1.891.001<.00132
LARGE_INTESTINESEPSECS →+0.654+1.891<.001<.00132
LARGE_INTESTINEOSBPL9 →+0.478+2.700<.001.00132
LARGE_INTESTINECASP8AP2 →+0.548+2.286<.001<.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 2,245 associations by consensus.

SLCO1C1 by DLC1 expression — LUNG_SCLC

Box plot of SLCO1C1 in DLC1-low vs DLC1-high samples in LUNG_SCLC.

Explore this box plot interactively →

Exploration