DKC1

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, DKC1 mutation is significantly associated with the total protein of many other genes, with 25 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible DKC1-associated genes across cancer lineages are ATM, eIF4E, and Caspase-7-cleavedD198. Each is linked with DKC1 in more than 2 cancer types. Because this analysis shows association rather than direction, both DKC1-to-partner and partner-to-DKC1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, ATM grouped by DKC1-low versus DKC1-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (DKC1→partner) and Y-score (partner→DKC1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECATM →-0.561-2.502<.001.00133
UCECeIF4E →+0.176+1.874.012.00232
UCECCaspase-7-cleavedD198 →+0.607+1.697.002.01232
UCECc-Kit →-0.222-2.201.004<.00132
UCECINPP4B →-0.221-2.000.041.02931
UCECJNK_pT183_Y185 →-0.151-2.000.007.00931
Each partner links to its Q-omics profile. Showing the 6 strongest of 25 associations by consensus.

ATM by DKC1 expression — UCEC

Box plot of ATM in DKC1-low vs DKC1-high samples in UCEC.

Explore this box plot interactively →

Exploration