DHX29

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, DHX29 mutation is significantly associated with the RNA expression of many other genes, with 4,393 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible DHX29-associated genes across cancer lineages are HBAP1, MIR1225, and FANCE. Each is linked with DHX29 in more than 3 cancer types. Because this analysis shows association rather than direction, both DHX29-to-partner and partner-to-DHX29 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, HBAP1 grouped by DHX29-low versus DHX29-high in LGG.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (DHX29→partner) and Y-score (partner→DHX29) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LGGHBAP1 →+0.135+5.039<.001.00934
LUADMIR1225 →+0.102+4.748<.001.00333
COADFANCE →+0.434+3.403.006.00433
COADCCNB1 →+0.716+3.362.001.00533
UCECHAUS2 →+0.608+1.830<.001<.00133
BLCARNU1-19P →+0.283+4.715.008.00133
Each partner links to its Q-omics profile. Showing the 6 strongest of 4,393 associations by consensus.

HBAP1 by DHX29 expression — LGG

Box plot of HBAP1 in DHX29-low vs DHX29-high samples in LGG.

Explore this box plot interactively →

Exploration