DERA

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, DERA mutation is significantly associated with the RNA expression of many other genes, with 20 significant associations in total. BLOOD_Leukemia shows the largest number of these associations.

The most reproducible DERA-associated genes across cancer lineages are CGB2, HAND1, and OR11H1. Each is linked with DERA in more than 1 cancer types. Because this analysis shows association rather than direction, both DERA-to-partner and partner-to-DERA results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, CGB2 grouped by DERA-low versus DERA-high in BLOOD_Leukemia.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (DERA→partner) and Y-score (partner→DERA) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BLOOD_LeukemiaCGB2 →+1.136+4.234<.001.00331
BLOOD_LeukemiaHAND1 →+0.026+4.408<.001.00131
BLOOD_LeukemiaOR11H1 →+0.063+4.786<.001<.00131
BLOOD_LeukemiaSLCO1C1 →+0.076+3.705<.001.00731
BLOOD_LeukemiaGABRA6 →+0.309+3.855<.001.00731
BLOOD_LeukemiaG6PC2 →+0.200+4.037<.001.00431
Each partner links to its Q-omics profile. Showing the 6 strongest of 20 associations by consensus.

CGB2 by DERA expression — BLOOD_Leukemia

Box plot of CGB2 in DERA-low vs DERA-high samples in BLOOD_Leukemia.

Explore this box plot interactively →

Exploration