DEPTOR

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, DEPTOR protein abundance is significantly associated with the RNA expression of many other genes, with 16,471 significant associations in total. BRCA shows the largest number of these associations.

The most reproducible DEPTOR-associated genes across cancer lineages are RNA5SP277, SYBU, and COL21A1. Each is linked with DEPTOR in more than 6 cancer types. Because this analysis shows association rather than direction, both DEPTOR-to-partner and partner-to-DEPTOR results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, DEPTOR versus RNA5SP277 in GBM, with a Pearson correlation of 0.42.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (DEPTOR→partner) and Y-score (partner→DEPTOR) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMRNA5SP277 →+1.151+0.718<.001<.00137
BRCASYBU →+1.284+0.375<.001<.00136
UCECCOL21A1 →+1.875+0.510<.001<.00136
LSCCSELENBP1 →+1.167+0.442.003<.00136
OVGJB1 →+1.497+0.398<.001<.00136
LUADSLC1A7 →+1.776+0.407.001<.00136
Each partner links to its Q-omics profile. Showing the 6 strongest of 16,471 associations by consensus.

DEPTOR vs RNA5SP277 — GBM

Per-sample scatter of DEPTOR vs RNA5SP277 in GBM (Pearson r = 0.42).

Explore this scatter interactively →

Exploration