DENR

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, DENR mutation is significantly associated with the total protein of many other genes, with 7 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible DENR-associated genes across cancer lineages are Fibronectin, RAD51, and ATM. Each is linked with DENR in more than 1 cancer types. Because this analysis shows association rather than direction, both DENR-to-partner and partner-to-DENR results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Fibronectin grouped by DENR-low versus DENR-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (DENR→partner) and Y-score (partner→DENR) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECFibronectin →-0.429-3.160.018.01931
UCECRAD51 →-0.164-3.169.032.02031
UCECATM →-0.777-2.986.001.03531
UCECp27_pT198 →+0.119+3.169.043.02021
UCECAnnexin-1 →+0.919+2.827.001.03521
UCECeIF4E →+0.232+3.169.045.02011
Each partner links to its Q-omics profile. Showing the 6 strongest of 7 associations by consensus.

Fibronectin by DENR expression — UCEC

Box plot of Fibronectin in DENR-low vs DENR-high samples in UCEC.

Explore this box plot interactively →

Exploration