DENND1B

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, DENND1B protein abundance is significantly associated with the RNA expression of many other genes, with 5,004 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible DENND1B-associated genes across cancer lineages are ANKRD44-IT1, ANKRD44, and FGD2. Each is linked with DENND1B in more than 2 cancer types. Because this analysis shows association rather than direction, both DENND1B-to-partner and partner-to-DENND1B results are reported.

Each partner links to its own Q-omics profile.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (DENND1B→partner) and Y-score (partner→DENND1B) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUADANKRD44-IT1 →+0.680+0.252<.001<.00133
LUADANKRD44 →+0.580+0.218<.001.00233
LSCCFGD2 →+0.631+0.206<.001<.00133
LSCCSMIM13 →-0.435-0.193<.001<.00133
LSCCTUBB2B →-1.354-0.191<.001<.00133
LUADSTS →+0.481+0.152<.001.00133
Each partner links to its Q-omics profile. Showing the 6 strongest of 5,004 associations by consensus.

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