DEGS2

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, DEGS2 protein abundance is significantly associated with the RNA expression of many other genes, with 2,822 significant associations in total. BRCA shows the largest number of these associations.

The most reproducible DEGS2-associated genes across cancer lineages are COMP, MLPH, and ZMAT3. Each is linked with DEGS2 in more than 2 cancer types. Because this analysis shows association rather than direction, both DEGS2-to-partner and partner-to-DEGS2 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, DEGS2 versus COMP in CCRCC, with a Pearson correlation of -0.96.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (DEGS2→partner) and Y-score (partner→DEGS2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
CCRCCCOMP →-2.349-1.246<.001<.00133
BRCAMLPH →+1.788+0.774.003.00133
CCRCCZMAT3 →-1.226-1.146<.001.00332
LSCCHECW1 →-0.849-1.228.002.00232
BRCAITPK1 →+0.765+0.895<.001<.00132
OVICAM2 →-1.062-1.096.002<.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 2,822 associations by consensus.

DEGS2 vs COMP — CCRCC

Per-sample scatter of DEGS2 vs COMP in CCRCC (Pearson r = -0.96).

Explore this scatter interactively →

Exploration