DEGS2

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, DEGS2 mutation is significantly associated with the RNA expression of many other genes, with 4 significant associations in total. BLOOD_Leukemia shows the largest number of these associations.

The most reproducible DEGS2-associated genes across cancer lineages are CD300H, KAAG1, and WFDC12. Each is linked with DEGS2 in more than 1 cancer types. Because this analysis shows association rather than direction, both DEGS2-to-partner and partner-to-DEGS2 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, CD300H grouped by DEGS2-low versus DEGS2-high in LARGE_INTESTINE.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (DEGS2→partner) and Y-score (partner→DEGS2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LARGE_INTESTINECD300H →+0.039+4.415<.001.00731
BLOOD_LeukemiaKAAG1 →+0.093+3.855<.001.00731
BLOOD_LeukemiaWFDC12 →+0.198+3.874<.001.00531
BLOOD_LeukemiaDEFB4A →+0.096+4.269.001.00231
Each partner links to its Q-omics profile. Showing the 4 strongest of 4 associations by consensus.

CD300H by DEGS2 expression — LARGE_INTESTINE

Box plot of CD300H in DEGS2-low vs DEGS2-high samples in LARGE_INTESTINE.

Explore this box plot interactively →

Exploration