DEFB123

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, DEFB123 mutation is significantly associated with the RNA expression of many other genes, with 32 significant associations in total. SKCM shows the largest number of these associations.

The most reproducible DEFB123-associated genes across cancer lineages are TUBB8P9, CCDC58P2, and STRIT1. Each is linked with DEFB123 in more than 1 cancer types. Because this analysis shows association rather than direction, both DEFB123-to-partner and partner-to-DEFB123 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, TUBB8P9 grouped by DEFB123-low versus DEFB123-high in SKCM.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (DEFB123→partner) and Y-score (partner→DEFB123) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
SKCMTUBB8P9 →+0.035+4.296.008.00831
SKCMCCDC58P2 →+0.094+4.970<.001.00531
SKCMSTRIT1 →+0.150+4.296<.001.00831
SKCMRN7SL446P →+0.163+4.513<.001.00931
LUADRNA5SP177 →+0.322+7.930<.001.00831
LUADLINC00387 →+0.089+7.930<.001.00831
Each partner links to its Q-omics profile. Showing the 6 strongest of 32 associations by consensus.

TUBB8P9 by DEFB123 expression — SKCM

Box plot of TUBB8P9 in DEFB123-low vs DEFB123-high samples in SKCM.

Explore this box plot interactively →

Exploration