DEF8

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, DEF8 protein abundance is significantly associated with the RNA expression of many other genes, with 2,253 significant associations in total. LUAD shows the largest number of these associations.

The most reproducible DEF8-associated genes across cancer lineages are MCOLN2, ROPN1L-AS1, and PARP11-AS1. Each is linked with DEF8 in more than 2 cancer types. Because this analysis shows association rather than direction, both DEF8-to-partner and partner-to-DEF8 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, DEF8 versus MCOLN2 in HNSC, with a Pearson correlation of -0.50.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (DEF8→partner) and Y-score (partner→DEF8) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
HNSCMCOLN2 →-1.088-0.439.007.00732
HNSCROPN1L-AS1 →-0.539-0.444.004.00232
HNSCPARP11-AS1 →-0.739-0.385<.001.00332
UCECFAM83D →-1.021-0.337<.001.00232
UCECASF1B →-0.834-0.379.005<.00132
UCECALDH1A2 →+1.203+0.437<.001<.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 2,253 associations by consensus.

DEF8 vs MCOLN2 — HNSC

Per-sample scatter of DEF8 vs MCOLN2 in HNSC (Pearson r = -0.50).

Explore this scatter interactively →

Exploration