DDX56

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, DDX56 protein abundance is significantly associated with the RNA expression of many other genes, with 19,711 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible DDX56-associated genes across cancer lineages are POLD2, TWNK, and DKC1. Each is linked with DDX56 in more than 8 cancer types. Because this analysis shows association rather than direction, both DDX56-to-partner and partner-to-DDX56 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, DDX56 versus POLD2 in HNSC, with a Pearson correlation of 0.37.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (DDX56→partner) and Y-score (partner→DDX56) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
HNSCPOLD2 →+0.861+0.282<.001<.00139
LSCCTWNK →+0.839+0.425<.001<.00139
HNSCDKC1 →+0.953+0.236.002<.00139
BRCARECQL4 →+1.027+0.337<.001<.00139
CCRCCRAD54B →+0.783+0.209<.001<.00139
UCECDEPDC1B →+1.042+0.198<.001<.00139
Each partner links to its Q-omics profile. Showing the 6 strongest of 19,711 associations by consensus.

DDX56 vs POLD2 — HNSC

Per-sample scatter of DDX56 vs POLD2 in HNSC (Pearson r = 0.37).

Explore this scatter interactively →

Exploration