DDX56

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, DDX56 RNA expression is significantly associated with the go_rna of many other GO terms, with 3,951 significant associations in total. BLOOD_Lymphoma shows the largest number of these associations.

The most reproducible DDX56-associated GO terms across cancer lineages are Positive regulation of isotype switching to IgG isotypes, Nucleolar large rRNA transcription by RNA polymerase I, and Transcription initiation at RNA polymerase I promoter. Each is linked with DDX56 in more than 15 cancer types. Because this analysis shows association rather than direction, both DDX56-to-partner and partner-to-DDX56 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Positive regulation of isotype switching to IgG isotypes grouped by DDX56-low versus DDX56-high in PANCREAS.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (DDX56→partner) and Y-score (partner→DDX56) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
PANCREASPositive regulation of isotype switching to IgG isotypes →+0.124+0.621<.001<.001316
BONENucleolar large rRNA transcription by RNA polymerase I →+0.112+0.646<.001<.001314
SOFT_TISSUETranscription initiation at RNA polymerase I promoter →+0.113+0.795<.001<.001314
BONErRNA metabolic process →+0.141+0.907<.001<.001314
LARGE_INTESTINETranscription by RNA polymerase I →+0.089+0.441.002.002313
BLOOD_MyelomarRNA transcription →+0.132+1.156<.001<.001313
Each partner links to its Q-omics profile. Showing the 6 strongest of 3,951 associations by consensus.

Positive regulation of isotype switching to IgG isotypes by DDX56 expression — PANCREAS

Box plot of Positive regulation of isotype switching to IgG isotypes in DDX56-low vs DDX56-high samples in PANCREAS.

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