DDX41

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, DDX41 protein abundance is significantly associated with the RNA expression of many other genes, with 15,536 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible DDX41-associated genes across cancer lineages are HROB, DKC1, and KIF4A. Each is linked with DDX41 in more than 8 cancer types. Because this analysis shows association rather than direction, both DDX41-to-partner and partner-to-DDX41 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, DDX41 versus HROB in UCEC, with a Pearson correlation of 0.55.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (DDX41→partner) and Y-score (partner→DDX41) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECHROB →+0.885+0.195<.001<.00139
UCECDKC1 →+0.934+0.287<.001<.00139
UCECKIF4A →+1.190+0.192<.001<.00139
UCECCENPI →+0.937+0.257<.001<.00138
BRCAFOXM1 →+1.288+0.252<.001<.00138
UCECCDC20 →+1.906+0.262<.001<.00138
Each partner links to its Q-omics profile. Showing the 6 strongest of 15,536 associations by consensus.

DDX41 vs HROB — UCEC

Per-sample scatter of DDX41 vs HROB in UCEC (Pearson r = 0.55).

Explore this scatter interactively →

Exploration