DDX17

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, DDX17 mutation is significantly associated with the RNA expression of many other genes, with 903 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible DDX17-associated genes across cancer lineages are AVP, SMIM33, and C4orf50. Each is linked with DDX17 in more than 1 cancer types. Because this analysis shows association rather than direction, both DDX17-to-partner and partner-to-DDX17 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, AVP grouped by DDX17-low versus DDX17-high in UPPER_AERODIGESTIVE_TRACT.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (DDX17→partner) and Y-score (partner→DDX17) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UPPER_AERODIGESTIVE_TRACTAVP →+0.045+4.736<.001.00932
LARGE_INTESTINESMIM33 →+0.576+2.011<.001.00832
UPPER_AERODIGESTIVE_TRACTC4orf50 →+0.013+4.736<.001.00931
UPPER_AERODIGESTIVE_TRACTTRIM77 →+0.030+5.357<.001.00331
BLOOD_LymphomaKRTAP9-2 →+0.026+4.662<.001.00331
LARGE_INTESTINETOP3B →+0.740+2.502.001.00531
Each partner links to its Q-omics profile. Showing the 6 strongest of 903 associations by consensus.

AVP by DDX17 expression — UPPER_AERODIGESTIVE_TRACT

Box plot of AVP in DDX17-low vs DDX17-high samples in UPPER_AERODIGESTIVE_TRACT.

Explore this box plot interactively →

Exploration