DDN

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, DDN RNA expression is significantly associated with the protein abundance of many other proteins, with 22,342 significant associations in total. GBM shows the largest number of these associations.

The most reproducible DDN-associated proteins across cancer lineages are UTP18, NOC4L, and CHORDC1. Each is linked with DDN in more than 4 cancer types. Because this analysis shows association rather than direction, both DDN-to-partner and partner-to-DDN results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, DDN versus UTP18 in LSCC, with a Pearson correlation of 0.49.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (DDN→partner) and Y-score (partner→DDN) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LSCCUTP18 →+0.345+0.368<.001<.00135
BRCANOC4L →+0.420+0.657<.001<.00135
BRCACHORDC1 →+0.434+0.556<.001<.00135
LSCCDCAF13 →+0.349+0.446<.001<.00134
LSCCDNAJC2 →+0.478+0.502<.001<.00134
BRCAASL →-0.478-0.560<.001<.00134
Each partner links to its Q-omics profile. Showing the 6 strongest of 22,342 associations by consensus.

DDN vs UTP18 — LSCC

Per-sample scatter of DDN vs UTP18 in LSCC (Pearson r = 0.49).

Explore this scatter interactively →

Exploration