DCN

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, DCN mutation is significantly associated with the RNA expression of many other genes, with 2 significant associations in total. SKIN shows the largest number of these associations.

The most reproducible DCN-associated genes across cancer lineages are RBMXL3 and PNMA6E. Each is linked with DCN in more than 1 cancer types. Because this analysis shows association rather than direction, both DCN-to-partner and partner-to-DCN results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, RBMXL3 grouped by DCN-low versus DCN-high in SKIN.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (DCN→partner) and Y-score (partner→DCN) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
SKINRBMXL3 →+0.406+4.467<.001.00431
SKINPNMA6E →+0.053+4.095<.001.00931
Each partner links to its Q-omics profile. Showing the 2 strongest of 2 associations by consensus.

RBMXL3 by DCN expression — SKIN

Box plot of RBMXL3 in DCN-low vs DCN-high samples in SKIN.

Explore this box plot interactively →

Exploration