DAO

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, DAO protein abundance is significantly associated with the RNA expression of many other genes, with 5,405 significant associations in total. PDAC shows the largest number of these associations.

The most reproducible DAO-associated genes across cancer lineages are MT4, LRP3, and PLXNC1. Each is linked with DAO in more than 1 cancer types. Because this analysis shows association rather than direction, both DAO-to-partner and partner-to-DAO results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, DAO versus MT4 in GBM, with a Pearson correlation of 0.74.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (DAO→partner) and Y-score (partner→DAO) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMMT4 →+0.316+1.972<.001<.00131
GBMLRP3 →-1.146-1.258<.001.00731
GBMPLXNC1 →+1.064+1.529<.001.00731
GBMDUOXA2 →+0.213+1.487.001.00831
GBMALCAM →+1.381+0.719.001.00631
GBMLINC00469 →+0.055+1.402<.001.00131
Each partner links to its Q-omics profile. Showing the 6 strongest of 5,405 associations by consensus.

DAO vs MT4 — GBM

Per-sample scatter of DAO vs MT4 in GBM (Pearson r = 0.74).

Explore this scatter interactively →

Exploration