CYP4F11

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CYP4F11 mutation is significantly associated with the RNA expression of many other genes, with 4,856 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible CYP4F11-associated genes across cancer lineages are RNU1-17P, DHRS11, and OR5I1. Each is linked with CYP4F11 in more than 2 cancer types. Because this analysis shows association rather than direction, both CYP4F11-to-partner and partner-to-CYP4F11 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, RNU1-17P grouped by CYP4F11-low versus CYP4F11-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CYP4F11→partner) and Y-score (partner→CYP4F11) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECRNU1-17P →+0.147+1.935<.001.00133
UCECDHRS11 →+0.488+3.280<.001<.00132
HNSCOR5I1 →+0.044+6.763<.001<.00132
SKCMRANBP9 →+0.339+1.656.004.00132
UCECPRMT5 →+0.503+1.934.004.00232
SKCMCDK16 →+0.319+1.459<.001<.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 4,856 associations by consensus.

RNU1-17P by CYP4F11 expression — UCEC

Box plot of RNU1-17P in CYP4F11-low vs CYP4F11-high samples in UCEC.

Explore this box plot interactively →

Exploration