CTDP1

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CTDP1 protein abundance is significantly associated with the RNA expression of many other genes, with 11,917 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible CTDP1-associated genes across cancer lineages are RBFA, TXNL4A, and VPS4B. Each is linked with CTDP1 in more than 8 cancer types. Because this analysis shows association rather than direction, both CTDP1-to-partner and partner-to-CTDP1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, CTDP1 versus RBFA in OV, with a Pearson correlation of 0.52.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CTDP1→partner) and Y-score (partner→CTDP1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OVRBFA →+0.729+0.333<.001<.00139
OVTXNL4A →+0.509+0.211<.001<.00139
OVVPS4B →+0.676+0.263<.001.00138
OVATP9B →+0.765+0.300<.001<.00138
COADSOCS6 →+0.605+0.241<.001<.00137
COADPIGN →+0.703+0.355<.001<.00137
Each partner links to its Q-omics profile. Showing the 6 strongest of 11,917 associations by consensus.

CTDP1 vs RBFA — OV

Per-sample scatter of CTDP1 vs RBFA in OV (Pearson r = 0.52).

Explore this scatter interactively →

Exploration