CTDP1

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CTDP1 mutation is significantly associated with the total protein of many other genes, with 51 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible CTDP1-associated genes across cancer lineages are ATM, c-Met_pY1235, and FoxM1. Each is linked with CTDP1 in more than 2 cancer types. Because this analysis shows association rather than direction, both CTDP1-to-partner and partner-to-CTDP1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, ATM grouped by CTDP1-low versus CTDP1-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CTDP1→partner) and Y-score (partner→CTDP1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECATM →-0.387-2.893.006.00133
UCECc-Met_pY1235 →+0.079+2.115<.001<.00133
LUSCFoxM1 →+0.409+2.816.008.03632
UCECACC1 →+0.328+1.920.004.00832
UCECMEK1 →+0.365+1.736.001.00632
UCECmTOR_pS2448 →-0.170-2.228<.001.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 51 associations by consensus.

ATM by CTDP1 expression — UCEC

Box plot of ATM in CTDP1-low vs CTDP1-high samples in UCEC.

Explore this box plot interactively →

Exploration