CTAGE6

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CTAGE6 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,231 significant associations in total. KIRC shows the largest number of these associations.

The most reproducible CTAGE6-associated GO terms across cancer lineages are RNA localization, mRNA transport, and Establishment of RNA localization. Each is linked with CTAGE6 in more than 16 cancer types. Because this analysis shows association rather than direction, both CTAGE6-to-partner and partner-to-CTAGE6 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, RNA localization grouped by CTAGE6-low versus CTAGE6-high in DLBC.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (CTAGE6→partner) and Y-score (partner→CTAGE6) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
DLBCRNA localization →+0.048+0.040.005<.001317
DLBCmRNA transport →+0.044+0.039.008.001317
DLBCEstablishment of RNA localization →+0.049+0.040.004<.001317
DLBCPositive regulation of DNA recombination →+0.078+0.061<.001.001316
DLBCRNA export from nucleus →+0.051+0.035.005.003316
DLBCPositive regulation of DNA metabolic process →+0.046+0.037.003.001316
Each partner links to its Q-omics profile. Showing the 6 strongest of 6,231 associations by consensus.

RNA localization by CTAGE6 expression — DLBC

Box plot of RNA localization in CTAGE6-low vs CTAGE6-high samples in DLBC.

Explore this box plot interactively →

Exploration