Across TCGA patient cohorts, CT47A6 RNA expression is significantly associated with the mutation status of many other genes, with 20 significant associations in total. SKCM shows the largest number of these associations.

The most reproducible CT47A6-associated genes across cancer lineages are LRRC1, ACAT2, and SCAPER. Each is linked with CT47A6 in more than 1 cancer types. Because this analysis shows association rather than direction, both CT47A6-to-partner and partner-to-CT47A6 results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CT47A6→partner) and Y-score (partner→CT47A6) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	LRRC1 →	+4.832	+0.027	.002	<.001	3	1
LIHC	ACAT2 →	+5.173	+0.142	.001	<.001	3	1
LIHC	SCAPER →	+5.910	+0.191	<.001	<.001	3	1
LIHC	HTR2C →	+6.495	+0.249	<.001	<.001	3	1
LIHC	PHF6 →	+7.495	+0.332	<.001	<.001	3	1
LIHC	SREBF2 →	+5.495	+0.166	.001	<.001	3	1

Each partner links to its Q-omics profile. Showing the 6 strongest of 20 associations by consensus.

Exploration

CT47A6 survival (RNA) · tumor vs normal (RNA) · all CT47A6 data types