CSTA

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CSTA RNA expression is significantly associated with the protein abundance of many other proteins, with 19,736 significant associations in total. GBM shows the largest number of these associations.

The most reproducible CSTA-associated proteins across cancer lineages are CAPG, HCLS1, and LPXN. Each is linked with CSTA in more than 6 cancer types. Because this analysis shows association rather than direction, both CSTA-to-partner and partner-to-CSTA results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, CSTA versus CAPG in GBM, with a Pearson correlation of 0.71.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (CSTA→partner) and Y-score (partner→CSTA) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMCAPG →+0.596+1.063<.001<.00137
OVHCLS1 →+0.955+1.739<.001<.00137
GBMLPXN →+0.675+0.968<.001<.00137
GBMSH3BP1 →+0.344+0.907<.001<.00136
GBMAIF1 →+0.968+1.160<.001<.00136
GBMFERMT3 →+0.784+1.215<.001<.00136
Each partner links to its Q-omics profile. Showing the 6 strongest of 19,736 associations by consensus.

CSTA vs CAPG — GBM

Per-sample scatter of CSTA vs CAPG in GBM (Pearson r = 0.71).

Explore this scatter interactively →

Exploration