CST3

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, CST3 RNA expression is significantly associated with the go_rna of many other GO terms, with 5,873 significant associations in total. BONE shows the largest number of these associations.

The most reproducible CST3-associated GO terms across cancer lineages are Regulation of collagen catabolic process, Positive regulation of protein localization to endoplasmic reticulum, and Negative regulation of extracellular matrix disassembly. Each is linked with CST3 in more than 13 cancer types. Because this analysis shows association rather than direction, both CST3-to-partner and partner-to-CST3 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Regulation of collagen catabolic process grouped by CST3-low versus CST3-high in BLOOD_Leukemia.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (CST3→partner) and Y-score (partner→CST3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BLOOD_LeukemiaRegulation of collagen catabolic process →+0.337+2.964<.001<.001314
URINARY_TRACTPositive regulation of protein localization to endoplasmic reticulum →+0.122+1.759<.001<.001313
LUNG_SCLCNegative regulation of extracellular matrix disassembly →+0.767+1.890.003<.001313
URINARY_TRACTPositive regulation of plasma cell differentiation →+0.161+1.984<.001<.001312
OESOPHAGUSRegulation of protein localization to endoplasmic reticulum →+0.133+0.976.003.008114
BONERegulation of protein localization to membrane →+0.081+1.737<.001<.001312
Each partner links to its Q-omics profile. Showing the 6 strongest of 5,873 associations by consensus.

Regulation of collagen catabolic process by CST3 expression — BLOOD_Leukemia

Box plot of Regulation of collagen catabolic process in CST3-low vs CST3-high samples in BLOOD_Leukemia.

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Exploration