CSRP2

Across TCGA patient cohorts, CSRP2 mutation is significantly associated with the RNA expression of many other genes, with 539 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible CSRP2-associated genes across cancer lineages are LINC01995, RPS10-NUDT3, and LINC01050. Each is linked with CSRP2 in more than 1 cancer types. Because this analysis shows association rather than direction, both CSRP2-to-partner and partner-to-CSRP2 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, LINC01995 grouped by CSRP2-low versus CSRP2-high in COAD.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CSRP2→partner) and Y-score (partner→CSRP2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
COAD	LINC01995 →	+0.250	+5.003	<.001	.004	3	2
UCEC	RPS10-NUDT3 →	+0.251	+2.724	.006	.007	3	1
UCEC	LINC01050 →	+0.265	+2.479	<.001	.003	3	1
UCEC	ZNHIT3 →	+0.554	+3.606	.002	.001	3	1
UCEC	NOL12 →	+0.416	+3.338	.003	.005	3	1
UCEC	IMMP1L →	+0.546	+3.595	.001	.001	3	1

Each partner links to its Q-omics profile. Showing the 6 strongest of 539 associations by consensus.

LINC01995 by CSRP2 expression — COAD

Explore this box plot interactively →