CSRNP3

Across TCGA cell cohorts, CSRNP3 RNA expression is significantly associated with the go_rna of many other GO terms, with 3,594 significant associations in total. BONE shows the largest number of these associations.

The most reproducible CSRNP3-associated GO terms across cancer lineages are Chromosomal 5-methylcytosine DNA demethylation pathway, Negative regulation of transcription by RNA polymerase I, and RNA splicing, via transesterification reactions. Each is linked with CSRNP3 in more than 8 cancer types. Because this analysis shows association rather than direction, both CSRNP3-to-partner and partner-to-CSRNP3 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Chromosomal 5-methylcytosine DNA demethylation pathway grouped by CSRNP3-low versus CSRNP3-high in STOMACH.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (CSRNP3→partner) and Y-score (partner→CSRNP3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STOMACH	Chromosomal 5-methylcytosine DNA demethylation pathway →	+0.302	+1.076	<.001	<.001	3	8
STOMACH	Negative regulation of transcription by RNA polymerase I →	+0.116	+0.981	<.001	.001	3	8
OESOPHAGUS	RNA splicing, via transesterification reactions →	+0.086	+0.920	.001	.001	2	9
LIVER	Positive regulation of viral genome replication →	+0.106	+1.301	<.001	.004	3	8
BONE	NK T cell activation →	-0.199	-1.522	.001	<.001	3	8
STOMACH	Positive regulation of signal transduction by p53 class mediator →	+0.085	+0.943	<.001	.002	3	8

Each partner links to its Q-omics profile. Showing the 6 strongest of 3,594 associations by consensus.

Chromosomal 5-methylcytosine DNA demethylation pathway by CSRNP3 expression — STOMACH

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