CSRNP3

Across TCGA cell cohorts, CSRNP3 mutation is significantly associated with the mutation status of many other genes, with 852 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible CSRNP3-associated genes across cancer lineages are ABI2, TBP, and NR4A2. Each is linked with CSRNP3 in more than 3 cancer types. Because this analysis shows association rather than direction, both CSRNP3-to-partner and partner-to-CSRNP3 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, ABI2 grouped by CSRNP3-low versus CSRNP3-high in SKIN.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CSRNP3→partner) and Y-score (partner→CSRNP3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
SKIN	ABI2 →	+4.239	+5.053	.007	.007	1	4
LARGE_INTESTINE	TBP →	+3.007	+3.584	.008	.008	1	4
BLOOD_Leukemia	NR4A2 →	+3.108	+3.108	.008	.008	1	3
SKIN	VEGFC →	+4.239	+5.053	.007	.007	1	3
SKIN	ATXN7 →	+4.239	+5.053	.007	.007	1	3
SKIN	CPA3 →	+4.824	+5.392	.004	.004	1	3

Each partner links to its Q-omics profile. Showing the 6 strongest of 852 associations by consensus.

ABI2 by CSRNP3 expression — SKIN

Explore this box plot interactively →