CSRNP1

Across TCGA patient cohorts, CSRNP1 mutation is significantly associated with the RNA expression of many other genes, with 3,000 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible CSRNP1-associated genes across cancer lineages are RNA5SP422, MIR6077, and KMT5AP1. Each is linked with CSRNP1 in more than 2 cancer types. Because this analysis shows association rather than direction, both CSRNP1-to-partner and partner-to-CSRNP1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, RNA5SP422 grouped by CSRNP1-low versus CSRNP1-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CSRNP1→partner) and Y-score (partner→CSRNP1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
UCEC	RNA5SP422 →	+0.744	+1.848	<.001	<.001	3	3
SKCM	MIR6077 →	+0.276	+2.625	.001	.004	3	2
UCEC	KMT5AP1 →	+0.196	+1.280	<.001	.009	3	2
UCEC	RNA5SP412 →	+0.532	+1.782	<.001	.001	3	2
UCEC	CCDC3 →	-0.636	-1.807	.003	<.001	3	2
UCEC	KLHL21 →	+0.390	+2.415	.001	.003	3	2

Each partner links to its Q-omics profile. Showing the 6 strongest of 3,000 associations by consensus.

RNA5SP422 by CSRNP1 expression — UCEC

Explore this box plot interactively →