CSPG5

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CSPG5 RNA expression is significantly associated with the protein abundance of many other proteins, with 16,052 significant associations in total. GBM shows the largest number of these associations.

The most reproducible CSPG5-associated proteins across cancer lineages are ZMYM3, ARHGAP26, and ACAD8. Each is linked with CSPG5 in more than 4 cancer types. Because this analysis shows association rather than direction, both CSPG5-to-partner and partner-to-CSPG5 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, CSPG5 versus ZMYM3 in OV, with a Pearson correlation of 0.41.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (CSPG5→partner) and Y-score (partner→CSPG5) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OVZMYM3 →+0.407+0.967<.001.00135
LUADARHGAP26 →-0.328-0.714.002.00134
LUADACAD8 →+0.464+0.677.006.00234
GBMPNN →+0.340+1.434<.001<.00134
OVFANCD2_S1435 →+1.453+1.168<.001.00234
GBMSSRP1 →+0.330+0.889<.001.00334
Each partner links to its Q-omics profile. Showing the 6 strongest of 16,052 associations by consensus.

CSPG5 vs ZMYM3 — OV

Per-sample scatter of CSPG5 vs ZMYM3 in OV (Pearson r = 0.41).

Explore this scatter interactively →

Exploration