CSPG4P3Y

Across TCGA patient cohorts, CSPG4P3Y RNA expression is significantly associated with the go_rna of many other GO terms, with 1,621 significant associations in total. STAD shows the largest number of these associations.

The most reproducible CSPG4P3Y-associated GO terms across cancer lineages are Regulation of smoothened signaling pathway, Embryonic organ morphogenesis, and Smoothened signaling pathway. Each is linked with CSPG4P3Y in more than 3 cancer types. Because this analysis shows association rather than direction, both CSPG4P3Y-to-partner and partner-to-CSPG4P3Y results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Regulation of smoothened signaling pathway grouped by CSPG4P3Y-low versus CSPG4P3Y-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (CSPG4P3Y→partner) and Y-score (partner→CSPG4P3Y) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	Regulation of smoothened signaling pathway →	+0.055	+0.002	<.001	.004	2	4
STAD	Embryonic organ morphogenesis →	+0.063	+0.002	<.001	.002	3	3
STAD	Smoothened signaling pathway →	+0.052	+0.002	<.001	.005	2	4
STAD	Regulation of epithelial to mesenchymal transition →	+0.095	+0.002	<.001	.005	2	3
STAD	Sterol metabolic process →	+0.074	+0.002	<.001	.002	3	2
STAD	Bone mineralization →	+0.076	+0.002	<.001	.001	3	2

Each partner links to its Q-omics profile. Showing the 6 strongest of 1,621 associations by consensus.

Regulation of smoothened signaling pathway by CSPG4P3Y expression — STAD

Explore this box plot interactively →