CSNKA2IP

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CSNKA2IP RNA expression is significantly associated with the protein abundance of many other proteins, with 3,511 significant associations in total. GBM shows the largest number of these associations.

The most reproducible CSNKA2IP-associated proteins across cancer lineages are PTPN12, PIEZO1, and PPP1R18. Each is linked with CSNKA2IP in more than 1 cancer types. Because this analysis shows association rather than direction, both CSNKA2IP-to-partner and partner-to-CSNKA2IP results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, CSNKA2IP versus PTPN12 in GBM, with a Pearson correlation of -0.34.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (CSNKA2IP→partner) and Y-score (partner→CSNKA2IP) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMPTPN12 →-0.361-0.142<.001.00132
OVPIEZO1 →-0.435-0.022<.001.00832
OVPPP1R18 →-0.426-0.013.009.00732
GBMSTAM →+0.385+0.115<.001.00332
GBMPAFAH1B3 →+0.415+0.167<.001.00132
GBMPARK7 →+0.231+0.141.001.00232
Each partner links to its Q-omics profile. Showing the 6 strongest of 3,511 associations by consensus.

CSNKA2IP vs PTPN12 — GBM

Per-sample scatter of CSNKA2IP vs PTPN12 in GBM (Pearson r = -0.34).

Explore this scatter interactively →

Exploration