CSNK2A1

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CSNK2A1 RNA expression is significantly associated with the protein abundance of many other proteins, with 17,210 significant associations in total. GBM shows the largest number of these associations.

The most reproducible CSNK2A1-associated proteins across cancer lineages are CENPB, TRMT6, and ZCCHC3. Each is linked with CSNK2A1 in more than 7 cancer types. Because this analysis shows association rather than direction, both CSNK2A1-to-partner and partner-to-CSNK2A1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, CSNK2A1 versus CENPB in LSCC, with a Pearson correlation of 0.42.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (CSNK2A1→partner) and Y-score (partner→CSNK2A1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LSCCCENPB →+0.318+0.432<.001.00738
HNSCTRMT6 →+0.473+0.574<.001<.00138
LUADZCCHC3 →+0.718+0.496<.001<.00137
GBMADNP →+0.433+0.358<.001<.00137
LSCCESF1 →+0.360+0.575<.001<.00137
LUADESF1_S153 →+0.804+0.394.002.00137
Each partner links to its Q-omics profile. Showing the 6 strongest of 17,210 associations by consensus.

CSNK2A1 vs CENPB — LSCC

Per-sample scatter of CSNK2A1 vs CENPB in LSCC (Pearson r = 0.42).

Explore this scatter interactively →

Exploration