CSNK1E

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, CSNK1E RNA expression is significantly associated with the go_rna of many other GO terms, with 3,756 significant associations in total. BLOOD_Leukemia shows the largest number of these associations.

The most reproducible CSNK1E-associated GO terms across cancer lineages are Negative regulation of DNA-templated transcription initiation, Negative regulation of transcription initiation by RNA polymerase II, and Negative regulation of chromosome condensation. Each is linked with CSNK1E in more than 15 cancer types. Because this analysis shows association rather than direction, both CSNK1E-to-partner and partner-to-CSNK1E results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (CSNK1E→partner) and Y-score (partner→CSNK1E) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BONENegative regulation of DNA-templated transcription initiation →+0.115+0.908<.001<.001316
BONENegative regulation of transcription initiation by RNA polymerase II →+0.115+0.908<.001<.001316
SOFT_TISSUENegative regulation of chromosome condensation →+0.145+0.775<.001.001314
LARGE_INTESTINEMicrotubule polymerization →+0.118+0.963.001<.001314
BONESCF-dependent proteasomal ubiquitin-dependent protein catabolic process →+0.054+1.009<.001<.001314
OVARYRegulation of centriole-centriole cohesion →+0.150+0.740<.001.003313
Each partner links to its Q-omics profile. Showing the 6 strongest of 3,756 associations by consensus.

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