CSDE1

Across TCGA patient cohorts, CSDE1 RNA expression is significantly associated with the protein abundance of many other proteins, with 9,603 significant associations in total. PDAC shows the largest number of these associations.

The most reproducible CSDE1-associated proteins across cancer lineages are CTTNBP2NL, TRIM33, and AFAP1L2. Each is linked with CSDE1 in more than 4 cancer types. Because this analysis shows association rather than direction, both CSDE1-to-partner and partner-to-CSDE1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, CSDE1 versus CTTNBP2NL in LSCC, with a Pearson correlation of 0.61.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (CSDE1→partner) and Y-score (partner→CSDE1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LSCC	CTTNBP2NL →	+0.223	+0.378	<.001	<.001	3	5
GBM	TRIM33 →	+0.296	+0.293	.002	.002	3	5
PDAC	AFAP1L2 →	+0.362	+0.274	<.001	<.001	3	4
LSCC	PRPF38B →	+0.233	+0.383	<.001	<.001	3	4
LUAD	SDF2L1 →	-0.363	-0.389	<.001	<.001	3	4
BRCA	PTGFRN →	+0.474	+0.593	<.001	<.001	3	4

Each partner links to its Q-omics profile. Showing the 6 strongest of 9,603 associations by consensus.

CSDE1 vs CTTNBP2NL — LSCC

Explore this scatter interactively →