CSAG3

Across TCGA patient cohorts, CSAG3 mutation is significantly associated with the immune_cell of many other genes, with 3 significant associations in total. SKCM shows the largest number of these associations.

The most reproducible CSAG3-associated genes across cancer lineages are Basophils, Neutrophils, and Erythrocytes. Each is linked with CSAG3 in more than 1 cancer types. Because this analysis shows association rather than direction, both CSAG3-to-partner and partner-to-CSAG3 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Basophils grouped by CSAG3-low versus CSAG3-high in SKCM.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CSAG3→partner) and Y-score (partner→CSAG3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
SKCM	Basophils →	+0.166	+3.000	.044	.036	3	1
UCEC	Neutrophils →	+0.026	+3.751	.001	.020	3	1
SKCM	Erythrocytes →	-0.021	-3.163	.045	.020	2	1

Each partner links to its Q-omics profile. Showing the 3 strongest of 3 associations by consensus.

Basophils by CSAG3 expression — SKCM

Explore this box plot interactively →