CRLF3

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CRLF3 RNA expression is significantly associated with the protein abundance of many other proteins, with 16,763 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible CRLF3-associated proteins across cancer lineages are SUPT6H, BUB3, and LIG3. Each is linked with CRLF3 in more than 4 cancer types. Because this analysis shows association rather than direction, both CRLF3-to-partner and partner-to-CRLF3 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, CRLF3 versus SUPT6H in LSCC, with a Pearson correlation of 0.70.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (CRLF3→partner) and Y-score (partner→CRLF3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LSCCSUPT6H →+0.304+0.600<.001<.00135
GBMBUB3 →+0.227+0.328<.001<.00135
LSCCLIG3 →+0.505+0.602<.001<.00135
LSCCSPAST →+0.481+0.439<.001<.00135
LSCCXRCC1 →+0.298+0.507<.001<.00135
LSCCBLMH →+0.415+0.515<.001<.00135
Each partner links to its Q-omics profile. Showing the 6 strongest of 16,763 associations by consensus.

CRLF3 vs SUPT6H — LSCC

Per-sample scatter of CRLF3 vs SUPT6H in LSCC (Pearson r = 0.70).

Explore this scatter interactively →

Exploration