CREB3L1

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, CREB3L1 mutation is significantly associated with the RNA expression of many other genes, with 8 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible CREB3L1-associated genes across cancer lineages are PPP1R17, HSFY2, and GSG1L2. Each is linked with CREB3L1 in more than 1 cancer types. Because this analysis shows association rather than direction, both CREB3L1-to-partner and partner-to-CREB3L1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, PPP1R17 grouped by CREB3L1-low versus CREB3L1-high in LARGE_INTESTINE.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CREB3L1→partner) and Y-score (partner→CREB3L1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LARGE_INTESTINEPPP1R17 →+0.045+4.882.004<.00131
LARGE_INTESTINEHSFY2 →+0.015+4.562<.001<.00131
LARGE_INTESTINEGSG1L2 →+0.016+4.437<.001.00431
SKINOR1L3 →+0.014+4.415.001.00731
BLOOD_LymphomaAVP →+0.031+5.209<.001.00531
BLOOD_LeukemiaNKX2-6 →+0.591+5.201<.001.00631
Each partner links to its Q-omics profile. Showing the 6 strongest of 8 associations by consensus.

PPP1R17 by CREB3L1 expression — LARGE_INTESTINE

Box plot of PPP1R17 in CREB3L1-low vs CREB3L1-high samples in LARGE_INTESTINE.

Explore this box plot interactively →

Exploration