CPXM2

Across TCGA patient cohorts, CPXM2 mutation is significantly associated with the RNA expression of many other genes, with 2,596 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible CPXM2-associated genes across cancer lineages are LINC01852, RNA5SP453, and RASL12. Each is linked with CPXM2 in more than 3 cancer types. Because this analysis shows association rather than direction, both CPXM2-to-partner and partner-to-CPXM2 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, LINC01852 grouped by CPXM2-low versus CPXM2-high in SKCM.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CPXM2→partner) and Y-score (partner→CPXM2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
SKCM	LINC01852 →	-0.295	-1.887	<.001	.001	3	3
CESC	RNA5SP453 →	+0.209	+3.891	<.001	.002	3	3
LUAD	RASL12 →	-0.656	-2.807	.003	.003	3	3
LUAD	CACYBP →	+0.684	+2.819	<.001	.001	3	3
LUAD	STARD8 →	-0.651	-3.656	<.001	.001	3	3
LUAD	PSMB6 →	+0.532	+2.842	<.001	.001	3	3

Each partner links to its Q-omics profile. Showing the 6 strongest of 2,596 associations by consensus.

LINC01852 by CPXM2 expression — SKCM

Explore this box plot interactively →