CPXM1

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CPXM1 protein abundance is significantly associated with the RNA expression of many other genes, with 12,434 significant associations in total. BRCA shows the largest number of these associations.

The most reproducible CPXM1-associated genes across cancer lineages are COL1A1, PTGIS, and COL6A3. Each is linked with CPXM1 in more than 8 cancer types. Because this analysis shows association rather than direction, both CPXM1-to-partner and partner-to-CPXM1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, CPXM1 versus COL1A1 in BRCA, with a Pearson correlation of 0.68.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CPXM1→partner) and Y-score (partner→CPXM1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCACOL1A1 →+2.183+0.936<.001<.00139
CCRCCPTGIS →+1.498+0.529<.001.00339
BRCACOL6A3 →+1.940+0.962<.001<.00139
BRCAMEIS3 →+1.158+0.503<.001<.00138
BRCAPCOLCE →+1.332+0.845<.001<.00138
OVPXDN →+1.246+0.509.001.00338
Each partner links to its Q-omics profile. Showing the 6 strongest of 12,434 associations by consensus.

CPXM1 vs COL1A1 — BRCA

Per-sample scatter of CPXM1 vs COL1A1 in BRCA (Pearson r = 0.68).

Explore this scatter interactively →

Exploration