Across TCGA patient cohorts, CPTP RNA expression is significantly associated with the protein abundance of many other proteins, with 8,223 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible CPTP-associated proteins across cancer lineages are ARHGEF16, LYPLA2, and PHPT1. Each is linked with CPTP in more than 5 cancer types. Because this analysis shows association rather than direction, both CPTP-to-partner and partner-to-CPTP results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (CPTP→partner) and Y-score (partner→CPTP) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
HNSC	ARHGEF16 →	+0.505	+0.758	.001	<.001	2	6
LSCC	LYPLA2 →	+0.327	+0.579	<.001	<.001	3	5
LUAD	PHPT1 →	-0.333	-0.435	<.001	<.001	3	4
LSCC	ARHGEF16_S230 →	+0.746	+0.420	<.001	<.001	3	4
GBM	PUM1 →	+0.224	+0.422	<.001	<.001	3	4
LSCC	DFFA →	+0.302	+0.527	<.001	<.001	3	4

Each partner links to its Q-omics profile. Showing the 6 strongest of 8,223 associations by consensus.

Exploration

CPTP survival (RNA) · tumor vs normal (RNA) · all CPTP data types