Across TCGA patient cohorts, CPTP mutation is significantly associated with the RNA expression of many other genes, with 1,275 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible CPTP-associated genes across cancer lineages are FAM197Y1, CST12P, and RN7SL354P. Each is linked with CPTP in more than 1 cancer types. Because this analysis shows association rather than direction, both CPTP-to-partner and partner-to-CPTP results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CPTP→partner) and Y-score (partner→CPTP) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
COAD	FAM197Y1 →	+0.064	+7.741	<.001	.009	3	2
HNSC	CST12P →	+0.250	+5.736	<.001	.003	3	2
UCEC	RN7SL354P →	+0.188	+2.374	.008	.003	3	2
SKCM	LINC02467 →	+0.027	+4.624	.005	.005	3	2
SKCM	XAGE3 →	+2.251	+3.656	<.001	.008	3	2
SKCM	OR7E156P →	+0.927	+3.997	<.001	.003	3	2

Each partner links to its Q-omics profile. Showing the 6 strongest of 1,275 associations by consensus.

Exploration

CPTP survival (RNA) · tumor vs normal (RNA) · all CPTP data types