CPT2

Across TCGA patient cohorts, CPT2 RNA expression is significantly associated with the protein abundance of many other proteins, with 11,916 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible CPT2-associated proteins across cancer lineages are ARHGEF16, ABCD3, and SCP2. Each is linked with CPT2 in more than 4 cancer types. Because this analysis shows association rather than direction, both CPT2-to-partner and partner-to-CPT2 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, CPT2 versus ARHGEF16 in LSCC, with a Pearson correlation of 0.34.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (CPT2→partner) and Y-score (partner→CPT2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LSCC	ARHGEF16 →	+0.416	+0.272	<.001	<.001	3	5
LUAD	ABCD3 →	+0.604	+0.407	<.001	<.001	3	5
PDAC	SCP2 →	+0.362	+0.369	<.001	<.001	3	5
CCRCC	HDLBP →	-0.214	-0.284	.001	.002	3	5
LSCC	HOOK1 →	+0.541	+0.308	<.001	<.001	3	5
OV	ZMYM4_S1030 →	+0.646	+0.543	.004	.004	3	4

Each partner links to its Q-omics profile. Showing the 6 strongest of 11,916 associations by consensus.

CPT2 vs ARHGEF16 — LSCC

Explore this scatter interactively →