CPSF1

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CPSF1 protein abundance is significantly associated with the RNA expression of many other genes, with 18,725 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible CPSF1-associated genes across cancer lineages are TONSL, PRC1-AS1, and CENPA. Each is linked with CPSF1 in more than 8 cancer types. Because this analysis shows association rather than direction, both CPSF1-to-partner and partner-to-CPSF1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, CPSF1 versus TONSL in BRCA, with a Pearson correlation of 0.53.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CPSF1→partner) and Y-score (partner→CPSF1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCATONSL →+0.896+0.197<.001<.00139
UCECPRC1-AS1 →+0.426+0.128<.001<.00139
UCECCENPA →+1.098+0.159<.001<.00139
PDACKIF18A →+0.773+0.163<.001<.00139
UCECKIF11 →+0.904+0.161<.001<.00139
BRCANUF2 →+1.064+0.171<.001<.00139
Each partner links to its Q-omics profile. Showing the 6 strongest of 18,725 associations by consensus.

CPSF1 vs TONSL — BRCA

Per-sample scatter of CPSF1 vs TONSL in BRCA (Pearson r = 0.53).

Explore this scatter interactively →

Exploration